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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015910566.1_cds_XP_016460613.1_54031
CDS Infomation

[gene=LOC107784064] [db_xref=GeneID:107784064] [protein=polygalacturonase QRT2-like] [protein_id=XP_016460613.1] [location=join(146371..146400,146608..146742,146854..146991,147438..147608,148379..148405,148586..148793,148877..148958,149690..149798,150126..150242,150438..150683)] [gbkey=CDS]
Sequence

ATGTGTTCCTCTAACTCTTCATATACCATGAAAACTTTGGTTCTCTTGTTCATTCTTGGC
TTGACAAATTCAAGAATATCCTATGCAAGTATAATTGGATATGCAGGAAGTTTTAATGTC
CTGGATTATGGAGCTGCTGCTGATGGTATTACAGATGATTCTCAAGCATTTCTTAATGCT
TGGAATGATGCATGTTCATCAGCTGGTGGATCTCCTGAAGTGATTATTCCTCCAAATATG
ATATTTTTACTTAGTCCTGTCACATTCAGAGGTCCCTGCAATTCTGAAAACATCTATTTT
GTGATATCAGGTAGACTTGTTGCACCAAGCTCACCTGGTATATGGACCGGGCAGGATGCG
AGTCAGTGGCTGGCGTTTAGAAATGTTAGCGGTCTAATTGTCGATGGCTCAGGAACCATT
GATGGGCAAGGACAAGGATGGTGGGATCAATCATGTAGATACCACCCTGACATGGAAGGA
TGTACAAGATTAGCTCCTACTGCCTTGAAGTTCATTTTTTGCAGTCAGAGTTCTATTAGT
AACATTTACTTTGGCAACAGTGCCCAAACTCATATACTTATAGAGAGATGCAATGGATTC
AAAGTGGATAGTGTAATGATTGAATCTCCAGGAAATAGTCCAAATACTGATGGAATTCAC
ATTCAGTCTTCTCAATATGTGGCCATTACCAATTCTAAAATAAGCAGTGGGGATGATTGC
ATTTCAATTGGAGATTACACTTCTAATGTCCAAATATACAATATCCAATGTGGACCAGGT
CATGGTATAAGTATTGGAAGCTTAGGAAAAGGTGGTAATTTTGCTCAAGTAGAAAACATT
CATGTGAGCAATGCTTTCTTCTATGGAACTACAAATGGAGCTCGTATCAAGACATGGCAG
GTTGGCAGAGGATATGTACGAGATGTTATATTTGAGAATCTTGAATTTAACTCAGTCAAG
AACCCCATTATAATTGACCAGAATTACTGCGATGTTCGAGGAGCTTGCAAGGAAATGGTA
ACTGGAGTGCAAATCAGCAATGTTATTTACCAGAATATATTTGGAACATCGAGCACAAAT
ATCGCCATAAATCTGAACTGCAGTATGTCAGTGCCATGTACTGATATAACAATGCAACTA
ATACAACTAACATCAGCGACACCAGGAACAGCGACACCAGGAAGGGAAGTCACTGCTTAT
TGTAGGAATGCTTATGGCCAAGAATATAGTATTGAACCTGGTCCTTGTATCTCAGAATAT
TGA

Peptide Sequence

PEP ID

XP_016460613.1
PEP Infomation

PREDICTED: polygalacturonase QRT2-like [Nicotiana tabacum]
Sequence

MCSSNSSYTMKTLVLLFILGLTNSRISYASIIGYAGSFNVLDYGAAADGITDDSQAFLNA
WNDACSSAGGSPEVIIPPNMIFLLSPVTFRGPCNSENIYFVISGRLVAPSSPGIWTGQDA
SQWLAFRNVSGLIVDGSGTIDGQGQGWWDQSCRYHPDMEGCTRLAPTALKFIFCSQSSIS
NIYFGNSAQTHILIERCNGFKVDSVMIESPGNSPNTDGIHIQSSQYVAITNSKISSGDDC
ISIGDYTSNVQIYNIQCGPGHGISIGSLGKGGNFAQVENIHVSNAFFYGTTNGARIKTWQ
VGRGYVRDVIFENLEFNSVKNPIIIDQNYCDVRGACKEMVTGVQISNVIYQNIFGTSSTN
IAINLNCSMSVPCTDITMQLIQLTSATPGTATPGREVTAYCRNAYGQEYSIEPGPCISEY

Transcript Sequence

Gene sequence data has not been registered.